R-universe - gflab (FengGao Lab @ SYSU)

gfplot - Publication-Ready Figures for Cancer Bioinformatics

A compact plotting toolkit for cancer bioinformatics figures. Provides publication-ready Kaplan-Meier curves with hazard ratios, ROC and time-dependent ROC curves, multiple-ROC comparisons, risk-score distributions, PCA and UMAP projections, boxplots and correlation plots, lasso coefficient paths, enrichment plots, and immune-infiltration radar charts. Palette helpers return colour-blind-friendly colours in journal styles.

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2.92 score 1 stars 167 scripts

clinstats - Clinical Research Statistics Toolkit

Statistical utilities that recur in clinical and translational research workflows: receiver operating characteristic (ROC) summaries, odds ratios, univariable and multivariable Cox and logistic regression tables, time-dependent survival cut points, resampling-based Cox screening, TCGA clinical extraction, and expression-matrix cleaning. Includes curated colorectal cancer clinical datasets assembled from public repositories, a Quarto report template, and tidy data-frame output that is convenient for both interactive and programmatic use.

Last updated

2.70 score 1 scripts